Published online 28 June 2004 doi:10.1084/jem.20031680
Rockefeller University Press, 0022-1007 $8.00
JEM, Volume 200, Number 1, 13-24
Natural HLA Class I Polymorphism Controls the Pathway of Antigen Presentation and Susceptibility to Viral Evasion
Danielle Zernich1,
Anthony W. Purcell1,
Whitney A. Macdonald1,
Lars Kjer-Nielsen1,
Lauren K. Ely2,
Nihay Laham1,
Tanya Crockford1,
Nicole A. Mifsud1,
Mandvi Bharadwaj1,
Linus Chang1,
Brian D. Tait3,
Rhonda Holdsworth3,
Andrew G. Brooks1,
Stephen P. Bottomley2,
Travis Beddoe2,
Chen Au Peh4,
Jamie Rossjohn2, and
James McCluskey1
1 Department of Microbiology and Immunology, University of Melbourne, Parkville, Victoria 3010, Australia
2 The Protein Crystallography Unit, Department of Biochemistry and Molecular Biology, School of Biomedical Sciences, Monash University, Clayton, Victoria 3800, Australia
3 Victorian Transplantation and Immunogenetics Service, Australian Red Cross Blood Service, South Melbourne, Victoria 3205, Australia
4 Renal Unit, Royal Adelaide Hospital, North Terrace, Adelaide, South Australia 5000, Australia
Address correspondence to James McCluskey, Dept. of Microbiology and Immunology, The University of Melbourne, Parkville, Victoria 3010, Australia. Phone: 61-3-83445709; Fax: 61-3-93473226; email: jamesm1{at}unimelb.edu.au; or Jamie Rossjohn, Dept. of Biochemistry and Molecular Biology, Monash University, Victoria 3800, Australia. Phone: 61-3-99053736; Fax: 61-3-99054699; email: Jamie.Rossjohn{at}med.monash.edu.au
HLA class I polymorphism creates diversity in epitope specificity and T cell repertoire. We show that HLA polymorphism also controls the choice of Ag presentation pathway. A single amino acid polymorphism that distinguishes HLA-B*4402 (Asp116) from B*4405 (Tyr116) permits B*4405 to constitutively acquire peptides without any detectable incorporation into the transporter associated with Ag presentation (TAP)-associated peptide loading complex even under conditions of extreme peptide starvation. This mode of peptide capture is less susceptible to viral interference than the conventional loading pathway used by HLA-B*4402 that involves assembly of class I molecules within the peptide loading complex. Thus, B*4402 and B*4405 are at opposite extremes of a natural spectrum in HLA class I dependence on the PLC for Ag presentation. These findings unveil a new layer of MHC polymorphism that affects the generic pathway of Ag loading, revealing an unsuspected evolutionary trade-off in selection for optimal HLA class I loading versus effective pathogen evasion.
Key Words: HLA polymorphism Ag presentation tapasin immune evasion
J. McCluskey and J. Rossjohn are senior authors on this paper.
D. Zernich and A.W. Purcell contributed equally to this work.
The online version of this article contains supplemental material.
Abbreviations used in this paper: Endo H, endoglycosidase H; PLC, peptide loading complex; TAP, transporter associated with Ag presentation.

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